This notebook is the settings used to run the simulations with tumor_tcell_ABM to compare to the in vitro experimental data
#Experiment tumor-tcell modules needed
from tumor_tcell.experiments.killing_experiments import killing_experiment
from tumor_tcell.library.population_plots import cytotoxicity_rep_plot
import warnings
warnings.filterwarnings('ignore')
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killing_experiment, takes as arguments:
killing_experiment(N_cells=55,save_name='2_1rep', num_rep=2, tumor_t_ratio=2)
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killing_experiment(N_cells=55,save_name='4', num_rep=2)
cytotoxicity_rep_plot takes the killing_experimental output and processes it for statistics and creates plots that summarize the cytotoxicity for the experiments
cytotoxicity_rep_plot(num_rep=2,save_name='2_1rep')
cytotoxicity_rep_plot(num_rep=5,save_name='4')